Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-544b in GLB Brain Sun Cluster 67 Table contains all genes in the GLB Brain Sun cluster number 67. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-544b 7014 TERF2 telomeric repeat binding factor 2 [Source:HGNC Symbol;Acc:11729] zzz999 26523 EIF2C1 eukaryotic translation initiation factor 2C, 1 [Source:HGNC Symbol;Acc:3262] P T 55737 VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13487] zzz999 4139 MARK1 MAP/microtubule affinity-regulating kinase 1 [Source:HGNC Symbol;Acc:6896] zzz999 91056 zzz999 zzz999 zzz999 10336 PCGF3 polycomb group ring finger 3 [Source:HGNC Symbol;Acc:10066] T 337867 UBAC2 UBA domain containing 2 [Source:HGNC Symbol;Acc:20486] zzz999 5534 PPP3R1 protein phosphatase 3, regulatory subunit B, alpha [Source:HGNC Symbol;Acc:9317] zzz999 91869 RFT1 RFT1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30220] zzz999 80014 WWC2 WW and C2 domain containing 2 [Source:HGNC Symbol;Acc:24148] T 7528 YY1 YY1 transcription factor [Source:HGNC Symbol;Acc:12856] zzz999 23518 R3HDM1 R3H domain containing 1 [Source:HGNC Symbol;Acc:9757] zzz999 883 CCBL1 cysteine conjugate-beta lyase, cytoplasmic [Source:HGNC Symbol;Acc:1564] zzz999 55743 CHFR checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:20455] zzz999 26065 LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:24489] P T 7879 RAB7A RAB7A, member RAS oncogene family [Source:HGNC Symbol;Acc:9788] zzz999 51071 DERA deoxyribose-phosphate aldolase (putative) [Source:HGNC Symbol;Acc:24269] zzz999 63923 TNN tenascin N [Source:HGNC Symbol;Acc:22942] zzz999 80254 CEP63 centrosomal protein 63kDa [Source:HGNC Symbol;Acc:25815] zzz999 114799 ESCO1 establishment of cohesion 1 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:24645] zzz999 85465 zzz999 zzz999 T 2131 EXT1 exostosin 1 [Source:HGNC Symbol;Acc:3512] zzz999 57728 WDR19 WD repeat domain 19 [Source:HGNC Symbol;Acc:18340] zzz999 57336 ZNF287 zinc finger protein 287 [Source:HGNC Symbol;Acc:13502] zzz999 285955 SPDYE1 speedy homolog E1 (Xenopus laevis) [Source:HGNC Symbol;Acc:16408] zzz999 84694 GJA10 gap junction protein, alpha 10, 62kDa [Source:HGNC Symbol;Acc:16995] zzz999 23253 ANKRD12 ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:29135] T 6925 TCF4 transcription factor 4 [Source:HGNC Symbol;Acc:11634] P T 5934 RBL2 retinoblastoma-like 2 (p130) [Source:HGNC Symbol;Acc:9894] zzz999 8914 TIMELESS timeless homolog (Drosophila) [Source:HGNC Symbol;Acc:11813] zzz999 54464 XRN1 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:30654] T 55720 TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25542] zzz999 10923 SUB1 SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985] P T 56913 C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 [Source:HGNC Symbol;Acc:24337] zzz999 9282 MED14 mediator complex subunit 14 [Source:HGNC Symbol;Acc:2370] zzz999 23180 RFTN1 raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:30278] T 54834 GDAP2 ganglioside induced differentiation associated protein 2 [Source:HGNC Symbol;Acc:18010] zzz999 22879 MON1B MON1 homolog B (yeast) [Source:HGNC Symbol;Acc:25020] T 83989 FAM172A family with sequence similarity 172, member A [Source:HGNC Symbol;Acc:25365] zzz999 80349 WDR61 WD repeat domain 61 [Source:HGNC Symbol;Acc:30300] zzz999 55186 SLC25A36 solute carrier family 25, member 36 [Source:HGNC Symbol;Acc:25554] T 91612 CHURC1 churchill domain containing 1 [Source:HGNC Symbol;Acc:20099] T 659 BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) [Source:HGNC Symbol;Acc:1078] P T 7175 TPR translocated promoter region (to activated MET oncogene) [Source:HGNC Symbol;Acc:12017] zzz999 152815 THAP6 THAP domain containing 6 [Source:HGNC Symbol;Acc:23189] T 55605 KIF21A kinesin family member 21A [Source:HGNC Symbol;Acc:19349] zzz999 57461 ISY1 ISY1 splicing factor homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29201] zzz999 4891 SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 [Source:HGNC Symbol;Acc:10908] zzz999 55752 SEPT11 septin 11 [Source:HGNC Symbol;Acc:25589] P T 1954 MEGF8 multiple EGF-like-domains 8 [Source:HGNC Symbol;Acc:3233] T 50717 DCAF8 DDB1 and CUL4 associated factor 8 [Source:HGNC Symbol;Acc:24891] T 5269 SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 [Source:HGNC Symbol;Acc:8950] zzz999 55255 WDR41 WD repeat domain 41 [Source:HGNC Symbol;Acc:25601] zzz999 79609 METTL21D methyltransferase like 21D [Source:HGNC Symbol;Acc:20352] zzz999 8539 API5 apoptosis inhibitor 5 [Source:HGNC Symbol;Acc:594] T 4707 NDUFB1 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa [Source:HGNC Symbol;Acc:7695] zzz999 56267 CCBL2 cysteine conjugate-beta lyase 2 [Source:HGNC Symbol;Acc:33238] zzz999 9857 CEP350 centrosomal protein 350kDa [Source:HGNC Symbol;Acc:24238] T 2958 GTF2A2 general transcription factor IIA, 2, 12kDa [Source:HGNC Symbol;Acc:4647] P T 6263 RYR3 ryanodine receptor 3 [Source:HGNC Symbol;Acc:10485] zzz999 51241 COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20213] zzz999 219988 PATL1 protein associated with topoisomerase II homolog 1 (yeast) [Source:HGNC Symbol;Acc:26721] zzz999 26224 FBXL3 F-box and leucine-rich repeat protein 3 [Source:HGNC Symbol;Acc:13599] zzz999 140901 STK35 serine/threonine kinase 35 [Source:HGNC Symbol;Acc:16254] zzz999 56990 CDC42SE2 CDC42 small effector 2 [Source:HGNC Symbol;Acc:18547] zzz999 202243 CCDC125 coiled-coil domain containing 125 [Source:HGNC Symbol;Acc:28924] zzz999 96764 TGS1 trimethylguanosine synthase 1 [Source:HGNC Symbol;Acc:17843] zzz999 2589 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) [Source:HGNC Symbol;Acc:4123] T 56882 CDC42SE1 CDC42 small effector 1 [Source:HGNC Symbol;Acc:17719] zzz999 55862 ECHDC1 enoyl CoA hydratase domain containing 1 [Source:HGNC Symbol;Acc:21489] zzz999 57380 MRS2 MRS2 magnesium homeostasis factor homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13785] T 23143 LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:HGNC Symbol;Acc:20309] T 64083 GOLPH3 golgi phosphoprotein 3 (coat-protein) [Source:HGNC Symbol;Acc:15452] zzz999 51631 LUC7L2 LUC7-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:21608] T 93 ACVR2B activin A receptor, type IIB [Source:HGNC Symbol;Acc:174] P T 25914 RTTN rotatin [Source:HGNC Symbol;Acc:18654] zzz999 7918 GPANK1 G patch domain and ankyrin repeats 1 [Source:HGNC Symbol;Acc:13920] zzz999 29855 UBN1 ubinuclein 1 [Source:HGNC Symbol;Acc:12506] T 57661 PHRF1 PHD and ring finger domains 1 [Source:HGNC Symbol;Acc:24351] zzz999 10972 TMED10 transmembrane emp24-like trafficking protein 10 (yeast) [Source:HGNC Symbol;Acc:16998] T 8019 BRD3 bromodomain containing 3 [Source:HGNC Symbol;Acc:1104] T 58528 RRAGD Ras-related GTP binding D [Source:HGNC Symbol;Acc:19903] zzz999 6497 SKI v-ski sarcoma viral oncogene homolog (avian) [Source:HGNC Symbol;Acc:10896] zzz999 257240 KLHL34 kelch-like 34 (Drosophila) [Source:HGNC Symbol;Acc:26634] zzz999 2765 GML glycosylphosphatidylinositol anchored molecule like protein [Source:HGNC Symbol;Acc:4375] zzz999 6935 ZEB1 zinc finger E-box binding homeobox 1 [Source:HGNC Symbol;Acc:11642] zzz999 254065 BRWD3 bromodomain and WD repeat domain containing 3 [Source:HGNC Symbol;Acc:17342] zzz999 55731 C17orf63 chromosome 17 open reading frame 63 [Source:HGNC Symbol;Acc:25563] T 64848 YTHDC2 YTH domain containing 2 [Source:HGNC Symbol;Acc:24721] zzz999 55161 TMEM33 transmembrane protein 33 [Source:HGNC Symbol;Acc:25541] T 80820 EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 [Source:HGNC Symbol;Acc:22223] T 25940 FAM98A family with sequence similarity 98, member A [Source:HGNC Symbol;Acc:24520] P T 84851 TRIM52 tripartite motif containing 52 [Source:HGNC Symbol;Acc:19024] P T 55814 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB [Source:HGNC Symbol;Acc:13652] zzz999 23583 SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 [Source:HGNC Symbol;Acc:17148] T 55196 C12orf35 chromosome 12 open reading frame 35 [Source:HGNC Symbol;Acc:25559] zzz999 5118 PCOLCE procollagen C-endopeptidase enhancer [Source:HGNC Symbol;Acc:8738] zzz999 79002 C19orf43 chromosome 19 open reading frame 43 [Source:HGNC Symbol;Acc:28424] zzz999 22889 KIAA0907 KIAA0907 [Source:HGNC Symbol;Acc:29145] P T 10936 GPR75 G protein-coupled receptor 75 [Source:HGNC Symbol;Acc:4526] zzz999 1511 CTSG cathepsin G [Source:HGNC Symbol;Acc:2532] zzz999 23383 MAU2 MAU2 chromatid cohesion factor homolog (C. elegans) [Source:HGNC Symbol;Acc:29140] T 64969 MRPS5 mitochondrial ribosomal protein S5 [Source:HGNC Symbol;Acc:14498] zzz999 145407 C14orf37 chromosome 14 open reading frame 37 [Source:HGNC Symbol;Acc:19846] T 26020 LRP10 low density lipoprotein receptor-related protein 10 [Source:HGNC Symbol;Acc:14553] zzz999 3954 LETM1 leucine zipper-EF-hand containing transmembrane protein 1 [Source:HGNC Symbol;Acc:6556] zzz999 2072 ERCC4 excision repair cross-complementing rodent repair deficiency, complementation group 4 [Source:HGNC Symbol;Acc:3436] T 8603 FAM193A family with sequence similarity 193, member A [Source:HGNC Symbol;Acc:16822] P T 5036 PA2G4 proliferation-associated 2G4, 38kDa [Source:HGNC Symbol;Acc:8550] zzz999 91801 ALKBH8 alkB, alkylation repair homolog 8 (E. coli) [Source:HGNC Symbol;Acc:25189] P T 1997 ELF1 E74-like factor 1 (ets domain transcription factor) [Source:HGNC Symbol;Acc:3316] zzz999 7366 UGT2B15 UDP glucuronosyltransferase 2 family, polypeptide B15 [Source:HGNC Symbol;Acc:12546] zzz999 7726 TRIM26 tripartite motif containing 26 [Source:HGNC Symbol;Acc:12962] T 79845 RNF122 ring finger protein 122 [Source:HGNC Symbol;Acc:21147] zzz999 5291 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide [Source:HGNC Symbol;Acc:8976] zzz999 9710 KIAA0355 KIAA0355 [Source:HGNC Symbol;Acc:29016] zzz999 116254 C6orf72 chromosome 6 open reading frame 72 [Source:HGNC Symbol;Acc:21074] zzz999 10763 NES nestin [Source:HGNC Symbol;Acc:7756] zzz999 4750 NEK1 NIMA (never in mitosis gene a)-related kinase 1 [Source:HGNC Symbol;Acc:7744] zzz999 54822 TRPM7 transient receptor potential cation channel, subfamily M, member 7 [Source:HGNC Symbol;Acc:17994] T 81537 SGPP1 sphingosine-1-phosphate phosphatase 1 [Source:HGNC Symbol;Acc:17720] zzz999 4719 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7707] zzz999 58517 RBM25 RNA binding motif protein 25 [Source:HGNC Symbol;Acc:23244] P T 8924 HERC2 hect domain and RLD 2 [Source:HGNC Symbol;Acc:4868] zzz999 5828 PEX2 peroxisomal biogenesis factor 2 [Source:HGNC Symbol;Acc:9717] zzz999 5095 PCCA propionyl CoA carboxylase, alpha polypeptide [Source:HGNC Symbol;Acc:8653] zzz999 6169 RPL38 ribosomal protein L38 [Source:HGNC Symbol;Acc:10349] zzz999 1803 DPP4 dipeptidyl-peptidase 4 [Source:HGNC Symbol;Acc:3009] zzz999 126204 NLRP13 NLR family, pyrin domain containing 13 [Source:HGNC Symbol;Acc:22937] zzz999 23325 KIAA1033 KIAA1033 [Source:HGNC Symbol;Acc:29174] zzz999 10497 UNC13B unc-13 homolog B (C. elegans) [Source:HGNC Symbol;Acc:12566] T 255967 PAN3 PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29991] P T 84501 SPIRE2 spire homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:30623] zzz999 221178 SPATA13 spermatogenesis associated 13 [Source:HGNC Symbol;Acc:23222] T 55907 CMAS cytidine monophosphate N-acetylneuraminic acid synthetase [Source:HGNC Symbol;Acc:18290] zzz999 3646 EIF3E eukaryotic translation initiation factor 3, subunit E [Source:HGNC Symbol;Acc:3277] zzz999 9736 USP34 ubiquitin specific peptidase 34 [Source:HGNC Symbol;Acc:20066] zzz999 10928 RALBP1 ralA binding protein 1 [Source:HGNC Symbol;Acc:9841] zzz999 64087 MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta) [Source:HGNC Symbol;Acc:6937] zzz999 5412 UBL3 ubiquitin-like 3 [Source:HGNC Symbol;Acc:12504] P T 10163 WASF2 WAS protein family, member 2 [Source:HGNC Symbol;Acc:12733] zzz999 89849 ATG16L2 ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:25464] zzz999 11171 STRAP serine/threonine kinase receptor associated protein [Source:HGNC Symbol;Acc:30796] T 6721 SREBF2 sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:11290] T 79800 ALS2CR8 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8 [Source:HGNC Symbol;Acc:14435] T 80315 CPEB4 cytoplasmic polyadenylation element binding protein 4 [Source:HGNC Symbol;Acc:21747] P T 80148 PQLC1 PQ loop repeat containing 1 [Source:HGNC Symbol;Acc:26188] zzz999 55600 ITLN1 intelectin 1 (galactofuranose binding) [Source:HGNC Symbol;Acc:18259] zzz999 91748 C14orf43 chromosome 14 open reading frame 43 [Source:HGNC Symbol;Acc:19853] zzz999 3658 IREB2 iron-responsive element binding protein 2 [Source:HGNC Symbol;Acc:6115] zzz999 6729 SRP54 signal recognition particle 54kDa [Source:HGNC Symbol;Acc:11301] zzz999 55183 RIF1 RAP1 interacting factor homolog (yeast) [Source:HGNC Symbol;Acc:23207] P T

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.